Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849827.1_cds_XP_016510950.1_23737
CDS Infomation

[gene=LOC107828192] [db_xref=GeneID:107828192] [protein=(3S,6E)-nerolidol synthase 1] [protein_id=XP_016510950.1] [location=join(143957..144133,144391..144652,145105..145483,146172..146390,147007..147145,148339..148590,149564..149842)] [gbkey=CDS]
Sequence

ATGGCAATGAGTAGAGCACTCTCCCCTTCTTATCTTTGTATGCACATAAGCAGCAGTTGC
CCAAATGGAAGCAGCAAATTTATTCAGGTTTCATGTGGAAGCTCTAACAAACGGGCCGTT
CAAGAAGATCTTCTCCGAACAACTTCCCATCGTCCTACTCCTACGAACTTCAATCAAGAT
GGATTTCACAGGAAATTTGCACTAGTGGAGGATGTTAAGCATGAACTAAAGACAAATGTA
AATCATAATCGGTTGGATAATCTTGTCTTAATCGACGCCCTTCAACGTATGGGAATTGAT
TATCATTTTCAAGAAGAAATTGAATCAGTTTTAGAGGAAGAGTACGTTCAAAGTGCTTGT
TTTCTCAAGTATCAAACCCATTTTGAGGTTTCTCTTTGTTTTCGGCTCTTGAGACAACAA
GGTTATTATGTGCCAGCAGATGTATTTAAAAAATTCAAGAACAAATATGATGGGACTTTT
GGATTGAACCTGAGCCAAGACATAAGTGGATTGATAGGTCTATATGAAGCAGCACAACTT
GGTGTAGAAGGTGAACATATACTAGATGAAGTTGCAAATTTCAGTGGGCAGAAACTGAAT
GCATATCTTGAACATAATGACTGTGTTCAAGCTAGAATTATTAATGACACATTGAAGTAT
CCCTATCACAAGAGTTTAGCAAGTTACAAGGCAAAAAATTTCATCACTAACTTTAGAGGA
GTTAATGGATGGGGAAGAAGCACCTTACAAGAATTGGCAAATATTGACTTCTCCATAGCC
CGAGAGATTCATCAACATGAAATGTCTCAAGTTTCCAGGTGGTGGAGAAGTCTTGGTTTA
GTTGAAGACTTGAAGCTTTTGAGAGACCAACCATTAAAATGGTATGCTTGGCCAATGGCA
CTCTTTGCAGATCCAAGAATGTCACTGCAAAGGATTGAGCTTGCAAAATGCATCTCTTTC
ATTTATGTTATAGATGACATCTTCGATGTTTATGGGACAGTTGAAGAATTAACCCTCTTC
ACAGAAGCCGTTAATAGGTGGGAATTGGATGCCATGGTGGACTTACCAGAATACATGAGA
ACACCTTATAGGGCACTTTATGATACCATTAATGGTATTGGCTACAACATCTACAAAATA
TATGGATGGAATCCCACTGAAAACCTGCGTAAAACGTGGGGAAATCTATGCAATGCATTT
CTAAAGGAAGCAAAATGGTTTGCCGATGGAGTCATACCAGCAGCAGATGAGTACCTAAAA
AATGGGCTTGTTAGTTCAGGAGTGCATGTGCTCTCAGTTCATATGTTCTATCTCTTAGGT
TTTGGTGTAACCAATAATGAAAGCTCTATTAATTTGGAAGATACATCAGCCATGGCGTCT
TCTGGGGCTATGATTCTTCGTCTTTGGGATGATCTTGGAAGCGCAAAGGATGAGAATCAA
GAAGGGAATGATGGCTCATACATAGAATGTTATATGAAGGGACAAAAAATTGCTTCCTTT
GAATTGGCGAGAAATCATGTGTTTAAGCTAATAGAAGATGAATGGAAGCAGCTTAACAAG
GAACATCTGCGTCTGAGTCGATCTTTAGGATCATTCACAAAAGCTTTACTTAATTTTGCA
AGAATGGTCCCTCTTATGTACAATTATGATGACAAGCACTCCCTCCCTATCCTTCAGGAA
TACATCAAGTCTATGTTGCATGTGTAG

Peptide Sequence

PEP ID

XP_016510950.1
PEP Infomation

PREDICTED: (3S,6E)-nerolidol synthase 1 [Nicotiana tabacum]
Sequence

MAMSRALSPSYLCMHISSSCPNGSSKFIQVSCGSSNKRAVQEDLLRTTSHRPTPTNFNQD
GFHRKFALVEDVKHELKTNVNHNRLDNLVLIDALQRMGIDYHFQEEIESVLEEEYVQSAC
FLKYQTHFEVSLCFRLLRQQGYYVPADVFKKFKNKYDGTFGLNLSQDISGLIGLYEAAQL
GVEGEHILDEVANFSGQKLNAYLEHNDCVQARIINDTLKYPYHKSLASYKAKNFITNFRG
VNGWGRSTLQELANIDFSIAREIHQHEMSQVSRWWRSLGLVEDLKLLRDQPLKWYAWPMA
LFADPRMSLQRIELAKCISFIYVIDDIFDVYGTVEELTLFTEAVNRWELDAMVDLPEYMR
TPYRALYDTINGIGYNIYKIYGWNPTENLRKTWGNLCNAFLKEAKWFADGVIPAADEYLK
NGLVSSGVHVLSVHMFYLLGFGVTNNESSINLEDTSAMASSGAMILRLWDDLGSAKDENQ
EGNDGSYIECYMKGQKIASFELARNHVFKLIEDEWKQLNKEHLRLSRSLGSFTKALLNFA
RMVPLMYNYDDKHSLPILQEYIKSMLHV

Transcript Sequence

Gene sequence data has not been registered.